DiShIn: Semantic Similarity Measures using Disjunctive Shared Information¶
This software package provides the basic functions to start using semantic similarity measures directly from a rdf or owl file.
- Getting started
- Other Examples
- Gene Ontology (GO) and UniProt proteins
- Chemical Entities of Biological Interest (ChEBI) Example
- Human Phenotype (HP) Example
- Human Disease Ontology (HDO) Example
- Ontology for Stem Cell Investigations (OSCI)
- Cell Ontology (CL)
- Environmental conditions, treatments and exposures ontology (ECTO)
- Environment Ontology (ENVO)
- Medical Subject Headings (MeSH) Example
- Radiology Lexicon (RadLex) Example
- WordNet Example
- Data Sources
- API
Reference:¶
- F. Couto and A. Lamurias, “Semantic similarity definition,” in Encyclopedia of Bioinformatics and Computational Biology (S. Ranganathan, K. Nakai, C. Schönbach, and M. Gribskov, eds.), vol. 1, pp. 870–876, Oxford: Elsevier, 2019 https://doi.org/10.1016/B978-0-12-809633-8.20401-9